Information for Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer (Motif 115)

G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A
Reverse Opposite:
C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A
p-value:1e-658
log p-value:-1.516e+03
FDR:NA
Information Content per bp:1.683
Number of Target Sequences with motif1017.0
Percentage of Target Sequences with motif40.91%
Number of Background Sequences with motif2107.3
Percentage of Background Sequences with motif4.64%
Average Position of motif in Targets0 +/- 0bp
Average Position of motif in Background0 +/- 0bp
Strand Bias (log2 ratio + to - strand density)0
Multiplicity (# of sites on avg that occur together)1
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:WWATRTAAACAN
WWATRTAAACAN
 G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:2
Score:0.98
Offset:1
Orientation:forward strand
Alignment:WWATRTAAACAN-
-WWTRTAAACAVG
 G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A A C G T
A C G T C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G

Foxf1/MA1606.1/Jaspar

Match Rank:3
Score:0.98
Offset:2
Orientation:forward strand
Alignment:WWATRTAAACAN-
--ATGTAAACAAA
 G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A A C G T
A C G T A C G T C G T A C G A T T C A G C A G T G C T A G C T A C T G A A G T C G C T A C T G A C G T A

FOXL1/MA0033.2/Jaspar

Match Rank:4
Score:0.96
Offset:4
Orientation:forward strand
Alignment:WWATRTAAACAN
----GTAAACA-
 G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A
A C G T A C G T A C G T A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A A C G T

fkh-2/MA0920.1/Jaspar

Match Rank:5
Score:0.96
Offset:4
Orientation:forward strand
Alignment:WWATRTAAACAN
----GTAAACAA
 G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A
A C G T A C G T A C G T A C G T C T A G C G A T G T C A C G T A C G T A G T A C C G T A G C T A

FOXG1/MA0613.1/Jaspar

Match Rank:6
Score:0.96
Offset:4
Orientation:forward strand
Alignment:WWATRTAAACAN
----GTAAACAA
 G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A
A C G T A C G T A C G T A C G T C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A

FOXK2/MA1103.2/Jaspar

Match Rank:7
Score:0.95
Offset:2
Orientation:forward strand
Alignment:WWATRTAAACAN-
--ATGTAAACAAG
 G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A A C G T
A C G T A C G T C G T A C G A T C T A G C G A T G C T A G T C A C T G A G A T C G C T A C G T A T C A G

Foxj2/MA0614.1/Jaspar

Match Rank:8
Score:0.95
Offset:4
Orientation:forward strand
Alignment:WWATRTAAACAN
----GTAAACAA
 G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A
A C G T A C G T A C G T A C G T C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A

FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer

Match Rank:9
Score:0.95
Offset:4
Orientation:reverse strand
Alignment:WWATRTAAACAN--
----GTAAACAWBN
 G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C G A T G T C A G T C A T G C A G A T C G C T A G C T A A C T G T C G A

Foxl2/MA1607.1/Jaspar

Match Rank:10
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-WWATRTAAACAN-
AATATGTAAACAAA
 A C G T G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A A C G T
C T G A C G T A C G A T C G T A C G A T C T A G C G A T G T C A G C T A C T G A G A T C G C T A G C T A T C G A