Information for VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer (Motif 303)


Reverse Opposite:

p-value:0.000e+00
log p-value:-1.988e+03
Information Content per bp:1.566
Total Number of Sequences:50001.0
Total Number of Target Sequences:3386.0
Total Instances of Motif:1163.5
Total Instances of Motif in Targets:849.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:NGAGGTCANNGAGTTCANNN
NGAGGTCANNGAGTTCANNN

RXRA::VDR/MA0074.1/Jaspar

Match Rank:2
Score:0.92
Offset:2
Orientation:forward strand
Alignment:NGAGGTCANNGAGTTCANNN
--GGGTCAACGAGTTCA---

Vdr/MA0693.1/Jaspar

Match Rank:3
Score:0.89
Offset:1
Orientation:forward strand
Alignment:NGAGGTCANNGAGTTCANNN
-GAGTTCATTGAGTTCA---

NR2F1/MA0017.2/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-NGAGGTCANNGAGTTCANNN
CAAAGGTCAAGGG--------

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.68
Offset:2
Orientation:forward strand
Alignment:NGAGGTCANNGAGTTCANNN
--AGGTCA------------

ESR2/MA0258.2/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:NGAGGTCANNGAGTTCANNN
--AGGTCACCCTGACCT---

PB0049.1_Nr2f2_1/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----NGAGGTCANNGAGTTCANNN
TCTCAAAGGTCACGAG--------

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.65
Offset:1
Orientation:forward strand
Alignment:NGAGGTCANNGAGTTCANNN
-AAGGTCAC-----------

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--NGAGGTCANNGAGTTCANNN
ATCAAGGTCA------------

EcR/usp/dmmpmm(Bergman)/fly

Match Rank:10
Score:0.64
Offset:1
Orientation:forward strand
Alignment:NGAGGTCANNGAGTTCANNN
-GAGGTCAATGACCTC----