Information for Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer (Motif 199)


Reverse Opposite:

p-value:0.000e+00
log p-value:-1.134e+03
Information Content per bp:1.641
Total Number of Sequences:0
Total Number of Target Sequences:0
Total Instances of Motif:0
Total Instances of Motif in Targets:0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct6(POU,Homeobox)/NPC-Oct6-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:WATGCAAATGAG
WATGCAAATGAG

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.98
Offset:0
Orientation:forward strand
Alignment:WATGCAAATGAG
TATGCWAATBAV

PH0144.1_Pou2f2/Jaspar

Match Rank:3
Score:0.95
Offset:-3
Orientation:forward strand
Alignment:---WATGCAAATGAG-
TTGTATGCAAATTAGA

Pou2f3/MA0627.1/Jaspar

Match Rank:4
Score:0.95
Offset:-3
Orientation:forward strand
Alignment:---WATGCAAATGAG-
TTGTATGCAAATTAGA

PH0145.1_Pou2f3/Jaspar

Match Rank:5
Score:0.95
Offset:-3
Orientation:forward strand
Alignment:---WATGCAAATGAG-
TTGTATGCAAATTAGA

POU5F1B/MA0792.1/Jaspar

Match Rank:6
Score:0.94
Offset:0
Orientation:forward strand
Alignment:WATGCAAATGAG
TATGCAAAT---

nub/MA0197.2/Jaspar

Match Rank:7
Score:0.94
Offset:0
Orientation:forward strand
Alignment:WATGCAAATGAG
TATGCAAATTAG

POU3F2/MA0787.1/Jaspar

Match Rank:8
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-WATGCAAATGAG
TTATGCAAATTA-

POU1F1/MA0784.1/Jaspar

Match Rank:9
Score:0.94
Offset:-2
Orientation:forward strand
Alignment:--WATGCAAATGAG
AATATGCAAATTAG

POU3F1/MA0786.1/Jaspar

Match Rank:10
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-WATGCAAATGAG
TTATGCAAATTA-