Information for Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer (Motif 240)


Reverse Opposite:

p-value:6.153e-200
log p-value:-4.587e+02
Information Content per bp:1.669
Total Number of Sequences:49999.9
Total Number of Target Sequences:2934.0
Total Instances of Motif:795.2
Total Instances of Motif in Targets:323.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:GTAGGTCACTGGGTCA
GTAGGTCACTGGGTCA

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:2
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GTAGGTCACTGGGTCA
-GAGGTCAAAAGGTCA

ESR2/MA0258.2/Jaspar

Match Rank:3
Score:0.70
Offset:2
Orientation:forward strand
Alignment:GTAGGTCACTGGGTCA-
--AGGTCACCCTGACCT

Rarg/MA0859.1/Jaspar

Match Rank:4
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GTAGGTCACTGGGTCA-
-AAGGTCAAAAGGTCAA

RARA/MA0729.1/Jaspar

Match Rank:5
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GTAGGTCACTGGGTCA---
-GAGGTCAAAAGGTCAATG

Rarb/MA0857.1/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GTAGGTCACTGGGTCA
AAAGGTCAAAAGGTCA

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GTAGGTCACTGGGTCA
--AGGTCA--------

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GTAGGTCACTGGGTCA
-NAGGTCACNNTGACC

RTG3/Literature(Harbison)/Yeast

Match Rank:9
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GTAGGTCACTGGGTCA
---GGTCAC-------

PPARG/MA0066.1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GTAGGTCACTGGGTCA----
GTAGGTCACGGTGACCTACT