Information for HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer (Motif 126)


Reverse Opposite:

p-value:0.000e+00
log p-value:-1.348e+04
Information Content per bp:1.603
Total Number of Sequences:52990.0
Total Number of Target Sequences:26495.0
Total Instances of Motif:11708.0
Total Instances of Motif in Targets:10770.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:CANAGNNCAAAGTCCA
CANAGNNCAAAGTCCA

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.99
Offset:1
Orientation:forward strand
Alignment:CANAGNNCAAAGTCCA
-AGAGTCCAAAGTCCA

Hnf4a/MA0114.3/Jaspar

Match Rank:3
Score:0.90
Offset:2
Orientation:forward strand
Alignment:CANAGNNCAAAGTCCA--
--GGGGTCAAAGTCCAAT

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:4
Score:0.83
Offset:2
Orientation:forward strand
Alignment:CANAGNNCAAAGTCCA
--GAGGTCAAAGGTCA

RXRG/MA0856.1/Jaspar

Match Rank:5
Score:0.83
Offset:2
Orientation:forward strand
Alignment:CANAGNNCAAAGTCCA
--GGGGTCAAAGGTCA

Rxra/MA0512.2/Jaspar

Match Rank:6
Score:0.83
Offset:2
Orientation:forward strand
Alignment:CANAGNNCAAAGTCCA
--GGGGTCAAAGGTCA

RXRB/MA0855.1/Jaspar

Match Rank:7
Score:0.82
Offset:2
Orientation:forward strand
Alignment:CANAGNNCAAAGTCCA
--GGGGTCAAAGGTCA

Nr2f6/MA0677.1/Jaspar

Match Rank:8
Score:0.82
Offset:2
Orientation:forward strand
Alignment:CANAGNNCAAAGTCCA
--GAGGTCAAAGGTCA

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.81
Offset:2
Orientation:forward strand
Alignment:CANAGNNCAAAGTCCA
--TAGGGCAAAGGTCA

NR2C2/MA0504.1/Jaspar

Match Rank:10
Score:0.80
Offset:1
Orientation:forward strand
Alignment:CANAGNNCAAAGTCCA
-AGGGGTCAGAGGTCA