Information for ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer (Motif 71)


Reverse Opposite:

p-value:0.000e+00
log p-value:-1.552e+04
Information Content per bp:1.638
Total Number of Sequences:29999.0
Total Number of Target Sequences:13064.0
Total Instances of Motif:9699.8
Total Instances of Motif in Targets:9266.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:NAGGTCACNNTGACC
NAGGTCACNNTGACC

ESR1/MA0112.3/Jaspar

Match Rank:2
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:NAGGTCACNNTGACC--
CAGGTCACCGTGACCTT

ESR2/MA0258.2/Jaspar

Match Rank:3
Score:0.95
Offset:1
Orientation:forward strand
Alignment:NAGGTCACNNTGACC-
-AGGTCACCCTGACCT

PPARG/MA0066.1/Jaspar

Match Rank:4
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-NAGGTCACNNTGACC----
GTAGGTCACGGTGACCTACT

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.70
Offset:1
Orientation:forward strand
Alignment:NAGGTCACNNTGACC
-AGGTCA--------

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.69
Offset:0
Orientation:forward strand
Alignment:NAGGTCACNNTGACC
AAGGTCAC-------

RORA/MA0071.1/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---NAGGTCACNNTGACC
ATCAAGGTCA--------

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:8
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-NAGGTCACNNTGACC
GTAGGTCACTGGGTCA

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--NAGGTCACNNTGACC
TCAAGGTCAN-------

RTG3/Literature(Harbison)/Yeast

Match Rank:10
Score:0.66
Offset:2
Orientation:forward strand
Alignment:NAGGTCACNNTGACC
--GGTCAC-------