Information for Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer (Motif 46)


Reverse Opposite:

p-value:0.000e+00
log p-value:-4.505e+03
Information Content per bp:1.572
Total Number of Sequences:0
Total Number of Target Sequences:0
Total Instances of Motif:0
Total Instances of Motif in Targets:0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:ACTYKNATTCGTGNTACTTC
ACTYKNATTCGTGNTACTTC

SIG1/SIG1_H2O2Hi/[](Harbison)/Yeast

Match Rank:2
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:ACTYKNATTCGTGNTACTTC
-------TTGTTGATTCCT-

HSF1/HSF1_H2O2Lo/11-HSF1(Harbison)/Yeast

Match Rank:3
Score:0.54
Offset:7
Orientation:forward strand
Alignment:ACTYKNATTCGTGNTACTTC
-------TTCTAGNNCNTTC

PB0155.1_Osr2_2/Jaspar

Match Rank:4
Score:0.54
Offset:8
Orientation:forward strand
Alignment:ACTYKNATTCGTGNTACTTC----
--------ACTTGCTACCTACACC

DMRT3/MA0610.1/Jaspar

Match Rank:5
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:ACTYKNATTCGTGNTACTTC
---------NTTGATACATT

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:6
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:ACTYKNATTCGTGNTACTTC----
-------TTCNAAGTACTTNNNNN

ovo/dmmpmm(Down)/fly

Match Rank:7
Score:0.54
Offset:10
Orientation:forward strand
Alignment:ACTYKNATTCGTGNTACTTC-
----------CCGTTACTTTT

PB0154.1_Osr1_2/Jaspar

Match Rank:8
Score:0.53
Offset:8
Orientation:forward strand
Alignment:ACTYKNATTCGTGNTACTTC----
--------ACATGCTACCTAATAC

so/MA0246.1/Jaspar

Match Rank:9
Score:0.52
Offset:11
Orientation:forward strand
Alignment:ACTYKNATTCGTGNTACTTC
-----------TGATAC---

LHY(Myb)/Seedling-LHY-ChIP-Seq(GSE52175)/Homer

Match Rank:10
Score:0.52
Offset:11
Orientation:reverse strand
Alignment:ACTYKNATTCGTGNTACTTC-
-----------AGATATTTHT